Difference between revisions of "Lesson05"

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==Core Readings==
 
==Core Readings==
  
 +
* [https://www.tableau.com/learn/whitepapers/visualizing-survey-data?ref=wc&signin=87976443b721a885b33a300166b02e22 Visualizing Survey Data]
 
* [https://onlinelibrary-wiley-com.libproxy.smu.edu.sg/doi/full/10.1002/wics.1192 Mosaic Plots]
 
* [https://onlinelibrary-wiley-com.libproxy.smu.edu.sg/doi/full/10.1002/wics.1192 Mosaic Plots]
 
* [https://kosara.net/papers/2010/Kosara_BeautifulVis_2010.pdf Turning a Table into a Tree: Growing Parallel Sets into a Purposeful Project]
 
* [https://kosara.net/papers/2010/Kosara_BeautifulVis_2010.pdf Turning a Table into a Tree: Growing Parallel Sets into a Purposeful Project]

Revision as of 22:20, 23 September 2018

Vaa logo.jpg ISSS608 Visual Analytics and Applications

About

Weekly Session

Assignment

Visual Analytics Project

Course Resources

 



Readings

Core Readings


Optional Readings


R Methods

Ternary Plot

  • R packages for creating ternary plot
    • Ternary, which employs the native plot functions;
    • Plotly, which uses a bespoke suite of plotting functions;
    • vcd, which contains the function ternaryplot;
    • ggtern, an extension to ggplot2.


Heatmap

  • Using R to draw a Heatmap from Microarray Data
  • R packages for creating heatmap
    • heatmap() [R base function, stats package]: Draws a simple heatmap.
    • heatmap.2() [gplots R package]: Draws an enhanced heatmap compared to the R base function.
    • pheatmap() [pheatmap R package]: Draws pretty heatmaps and provides more control to change the appearance of heatmaps.
    • Heatmap() [ComplexHeatmap R/Bioconductor package]: Draws, annotates and arranges complex heatmaps (very useful for genomic data analysis)
    • Superheatmap
    • d3heatmap() [d3heatmap R package]: Draws an interactive/clickable heatmap