Difference between revisions of "ISSS608 2017-18 T3 Assign Wang Runyu Data Visualization"

From Visual Analytics and Applications
Jump to navigation Jump to search
Line 26: Line 26:
 
==Patterns of all of the bird species==
 
==Patterns of all of the bird species==
 
===Overview Patterns===
 
===Overview Patterns===
The plot below indicates the birds location of all the species. The darker color indicated more appearance of the same bird have been found at the same location. All species spread over the entire preserve. Most of birds form their own society.  
+
The plot below indicates the birds location of all the species. The darker color indicated more appearance of the same bird have been found at the same location. All species spread over the entire preserve. Most of birds form their own society. They likely to live together as a community.  
 
[[File:Pattern overview all.png|700px]]
 
[[File:Pattern overview all.png|700px]]
 
<br>
 
<br>
To confirm whether all the birds
+
To confirm the pattern for every bird species, plot the graph and observe the location. Below are some examples.
 +
[[File:Pattern one kind.png]]
  
 
===Pattern of Different Quarter===
 
===Pattern of Different Quarter===

Revision as of 03:20, 8 July 2018

Brambling20male-zzzzzzzz.jpg VAST Mini Challenge 1: "Cheep" Shots?

Background

Data Preparation

Data Visualization

Conclusions

 


Patterns of all of the bird species

Overview Patterns

The plot below indicates the birds location of all the species. The darker color indicated more appearance of the same bird have been found at the same location. All species spread over the entire preserve. Most of birds form their own society. They likely to live together as a community. Pattern overview all.png
To confirm the pattern for every bird species, plot the graph and observe the location. Below are some examples. Pattern one kind.png

Pattern of Different Quarter

Pattern Around Dumping Site

Q2

Visual Analytical Approach

Remove Highly Correlated Features

As the text format outcome from seewave package(analyzeFolder function) contains 69 features, it is not practical for us to analyze all the features visually. In the first step, I use findCorrelation() function to eliminate highly correlated features. I set the pair-wise absolute correlation cut off to 0.6.

Correlation Plot

remove features based on corr plot observations

Corr plot q2 visual method.png

Corrplot, select variables, we not only consider to check the variables nearby, but all the variables For example, group of 'specSlape_sd', 'harmonics_median', 'peakFreq_median', I choose 'peakFreq_median'.

Trellis Plot for Variable Density
Density plot q2 visual method.png

Machine Learning Approach

Random Forest

Decision Tree