ISSS608 2017-18 T1 Assign WANG RUI Insights

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Mission

Information

Investigation

Insights


 


6 Steps to the Truth:
Step #6: Complete the Picture.


On May 17 during lunch hour, a truck got an accident on bridge 610 over the river. The spot was very close to downtown area, where many people worked at and therefore there are many witnesses. Around 500 microblogs related to this accident were reported. More than 20 Witnesses claimed that the severe accident smashed the truck and caused it to spill its cargo. But there was not much information on what the truck carried and what the leakage look like.
At that time, the sky is clear with West wind at 8 mile/hour. The river underneath flowed South at 3 mile/hour. 12 hours after the accident which is mid-night of May 18, there were less than 50 cases of fever reported. 7 hours later at 7 am in the morning, there was a outbreak of flu-like symptoms including fever, chill and breath shortage in working zones where people started to work. During the working hours of 8am to 6pm, 5891 ID cases on inhalation are posted. All of which are posted in the airborne transmission affecting locations.
On May 19, the situations become worse. 47% more inhalation cases were reported. Even worse, there was a outbreak of gastrointestinal symptoms along the vast river. The infected persons had symptoms like stomachache, vomit, diarrhea and nausea. These patients mostly stay at home from May 19 to May 20 and total number of gastrointestinal related patients didn't increase significantly.
On May 20, inhalation disease was still out of control and it was spreading. All hospitals were crowed by patients with flu-like symptoms.

Check this Tableau Dashboard


Origin
Question: Identify approximately where the outbreak started on the map (ground zero location). Outline the affected area. Explain how you arrived at your conclusion.
Answer: The outbreak location is near the 610 bridge. There are two parts of affected area. One part is on south of 610 bridge along the Vast river. The other part is on west of 610 bridge spread by the west wind.

Explanation Visualization
1. Make Hypothesis on Symptoms

Epi curve is used to visualize the onset of illness among cases associated with an outbreak. The outbreak's time pattern is implied by distribution of cases over time. According to the figures on the right, two epi curves are plotted separately for inhalation and gastrointestinal illness.

  • Inhalation: fever, breath, chill, flu, pneumonia
  • Gastrointestinal: stomach, nausea, vomit, diarrhea

Inhalation symptom outbroke at 7am on May 18 and maintain an increasing trend. Whereas gastrointestinal symptom outbroke one day later at 12 am on May 19, after which number of reported cases didn’t increase much. It is reasonable to assume that inhalation and gastrointestinal epidemic are having different patterns. Now let's zoom into hourly records at the outbreak points of time.

Wrq3-1.png
2. Outbreak Time Inspection - Inhalation Epidemic


According to the epi curve, the outbreak occurred at 7am on 18 May. As a comparison, both 7am and 8am message records which mentioned inhalation symptoms are plotted on the map. From 6am to 7am, there were only 2 relevant records observed. Then within one hour, 1,674 cases of inhalation disease outbroke. The affected locations are mostly to the west of downtown which are highlighted using a triangle shape envelop.

Wrq1-2.png
3. Outbreak Time Inspection - Gastrointestinal Epidemic


According to the epi curve, the outbreak occurred around 1am on 19 May. As a comparison, both 1am and 2am message records which mentioned gastrointestinal symptoms are plotted on the map. From 12am to 1am, there were only 1 relevant records observed. Then within one hour, 1,260 cases of gastrointestinal disease outbroke. The affected locations are mostly in the west south part of Smartpolis along the Vast river which are highlighted using a trapezoid envelop.

Wrq1-3.png
4. Tracing Ground 0


To find the outbreak location for both symptoms, I overlay the observations onto one map and show the envelop. An intersection point can be easily identified which is near the Vast river facing downtown. This location is taken as the ground zero of epidemic.

Wrground0.png
5. Conclusion and Validate the Hypothesis


Now, let's validate the hypothesis on two types of symptoms. The picture on the right shows people who have both symptoms and there are less than 30 records. As a summary, it is clearly observed that inhalation and gastrointestinal illness outbreak at different time and locations on different people. Therefore, the hypothesis is valid.

Wrq1 2.png


Transmission
Question: Present a hypothesis on how the infection is being transmitted. For example, is the method of transmission person-­to­-person, airborne, waterborne, or something else? Identify the trends that support your hypothesis.
Answer: The infection is transmitted from different channels. It is a mix of airborne, waterborne and person-to-person transmissions.

Explanation Visualization
1. Identify Special Event near Ground Zero Location


Findings
Findings.

Wrtruck.png
2. Identify Possible Transmission Methods


Findings
Findings.

Wrcal.png
3. Waterborne Transmission


It can easily be seen that on May 18th, only the downtown area is affected, while on May 19th also the south-western part of the city along the river is affected. On May 20th, additionally a lot of smaller dense clusters show up; these correspond to the locations of hospitals.
The word clouds to the right reveal further findings about development of characteristic symptoms. For the downtown area, the main symptoms developed from fever and shortness of breath on May 18th (a), to fever, flu and cough on May 19th (b). Finally, on May 20th pneumonia is reported (d). Interestingly, the symptoms in the south western part of the town are different. On both May 19th (c) and May 20th (e) diarrhea is the dominating symptom that people report about. Both diseases, however, may have their origin at the same location right in between the marked regions. An algorithm we designed to dis- cover anomalies in the geo-spatial distribution of Tweets identified a cluster right at that spot on May 17th. The Tweets talk about a truck accident with the truck spilling its cargo into the river. It is reasonable to hypothesize that the cargo was the cause of the dis- ease and the spread happened both waterborne along the river and airborne in wind direction to downtown.
Findings.

Wrwater.png
4. Airborne Transmission


Findings
Findings.

Wrair.png
5. Person-to-Person Transmission


Findings
Findings.

Wrperson.png



Containment
Question:Is the outbreak contained? Is it necessary for emergency management personnel to deploy treatment resources outside the affected area? Explain your reasoning. (Please limit your answer to ten images and 1000 words. )
Answer: The outbreak is not contained and it is getting worse. Emergency management actions are necessary to control the epidemic from spreading out.

Explanation Visualization
1. Descriptive Epidemiology Study - Inhalation Epidemic


Findings
Findings.

Wrtime1.png
2. Descriptive Epidemiology Study - Gastrointestinal Epidemic


Findings
Findings.

Wrtime2.png


Back to Step #5:
Perform Descriptive Epidemiology on Person.